Scientific#

Applications and libraries for applied mathematical and scientific problems#

2DECOMP&FFT

license

Library for 2D pencil decomposition and distributed Fast Fourier Transform

Tags: fft parallel distributed-memory openmpi

ABINIT

Release license stars forks last-commit issues pulls

ABINIT is a software suite to calculate the optical, mechanical, vibrational, and other observable properties of materials

Tags: electronic-structure quantum-chemistry physics molecular-dynamics mpi

ADflow

Release license stars forks last-commit issues pulls

A finite volume RANS solver tailored for gradient-based aerodynamic design optimization

Tags: simulation computational-fluid-dynamics automatic-differentiation adjoint structured multiblock overset python hpc cfd mpi

aenet

Release license stars forks last-commit issues pulls

Atomic interaction potentials based on artificial neural networks

astro-fortran

Release license stars forks last-commit issues pulls

Modern Fortran implementations of standard models used in fundamental astronomy

Tags: astronomy

BandUP

Release license stars forks last-commit issues pulls

Band Unfolding code for Plane-wave based calculations

BigDFT

Release license forks issues issues

fast, precise, and flexible DFT code for ab-initio atomistic simulation

Tags: electronic-structure wavelets density-functional-theory

CaNS

Release license stars forks last-commit issues pulls

A code for fast, massively-parallel direct numerical simulations (DNS) of canonical flows

Tags: fluid-dynamics fluid-simulation computational-fluid-dynamics turbulence high-performance-computing hpc cfd

Cantera

Release license stars forks last-commit issues pulls

Chemical kinetics, thermodynamics, and transport tool suite

Castro

Release license stars forks last-commit issues pulls

An adaptive mesh, astrophysical radiation hydrodynamics simulation code

Tags: adaptive mesh astrophysics radiation hydrodynamics

CFL3D

Release license stars forks last-commit issues pulls

Structured-grid, cell-centered, upwind-biased, Reynolds-averaged Navier-Stokes (RANS) code

CompDam_DGD

Release license stars forks last-commit issues pulls

continuum damage mechanics (CDM) material model intended for use with the Abaqus finite element code

cp2k

Release license stars forks last-commit issues pulls

quantum chemistry and solid state physics software package that can perform atomistic simulations

Tags: quantum-chemistry physics molecular-dynamics metadynamics mpi cuda

crest

Release license stars forks last-commit issues pulls

Conformer-rotamer ensemble search tool

Tags: computational-chemistry atomistic-simulations conformational-analysis metadynamics

CTSM

Release license stars forks last-commit issues pulls

The Community Terrestrial Systems Model

Dalton

Release license forks issues issues

Powerful molecular electronic structure program

Tags: electronic-structure relativistic

DAMASK

Release license stars forks last-commit issues pulls

A unified multi-physics crystal plasticity simulation package

Tags: plasticity simulation material multi-physics

DFT-D4

Release license stars forks last-commit issues pulls

A Generally Applicable Atomic-Charge Dependent London Dispersion Correction

Tags: dft-d dispersion-correction

dftatom

Release license stars forks last-commit issues pulls

Routines for Radial Integration of Dirac, Schrödinger, and Poisson Equations

Tags: electronic-structure atomic

DFTB+

Release license stars forks last-commit issues pulls

DFTB+ general package for performing fast atomistic simulations

Tags: tight-binding quantum-mechanics density-functional-theory

DL_POLY_4

Release license forks issues issues

classical molecular dynamics code developed at Daresbury Laboratory since 1992

Tags: molecular-dynamics mpi

Elk

license

An all-electron full-potential linearised augmented-plane wave (LAPW) code with many advanced features

Tags: density-functional-theory

eT

Release license forks issues issues

electronic structure program with coupled cluster, multiscale and multilevel methods

Tags: electronic-structure coupled-cluster

FATODE

Release license stars forks last-commit issues pulls

A Fortran library for the integration of ordinary differential equations with direct and adjoint sensitivity analysis capabilities

Tags: ode-solver

fds

Release license stars forks last-commit issues pulls

Large-eddy simulation code for low-speed flows, with an emphasis on smoke and heat transport from fires.

FLAME

Release license forks issues issues

a library for atomistic modeling environments.

Tags: machine-learning interatomic-potential crystal-structure-prediction electrostatic-energy-forces ions

flexi

Release license stars forks last-commit issues pulls

Open Source High-Order Unstructured Discontinuous Galerkin Fluid Dynamics Solver

fluidity

Release license stars forks last-commit issues pulls

Computational fluid dynamics code with adaptive unstructured mesh capabilities

Tags: cfd computational-fluid-dynamics unstructured

FMS

Release license stars forks last-commit issues pulls

Flexible Modeling System

Fortnet

Release license stars forks last-commit issues pulls

A software package for training Behler-Parrinello neural networks

Tags: machine-learning neural-networks bpnn atomistic-simulations

freeCappuccino

Release license stars forks last-commit issues pulls

A three-dimensional unstructured finite volume code for fluid flow simulations.

Tags: finite volume turbulent turbulence

FTorch

Release license stars forks last-commit issues pulls

Allows users to interface into the PyTorch machine learning library

Tags: machine-learning

Futility

license

Fortran utilities including unit test harness, arbitrary length strings, parameter list objects, timers, geometry definitions, file wrappers, linear algebra tools, and parallel computing support

Gemini3D

Release license stars forks last-commit issues pulls

3D ionospheric model covering local (> 10 gyroradii) to global scales.

GEOS-Chem

Release license stars forks last-commit issues pulls

Atmospheric chemistry model

Tags: climate chemistry atmospheric-modelling atmospheric-chemistry

HANDE

Release license stars forks last-commit issues pulls

Open source stochastic quantum chemistry

Tags: qmc electronic-structure

ICAR

Release license stars forks last-commit issues pulls

The Intermediate Complexity Atmospheric Research model

LATTE

Release license stars forks last-commit issues pulls

Open source density functional tight binding molecular dynamics

Tags: tight-binding molecular-dynamics

lesgo

Release license stars forks last-commit issues pulls

The Large-Eddy Simulation framework from the Turbulence Research Group at Johns Hopkins University

libmbd

Release license stars forks last-commit issues pulls

Many-body dispersion library

Tags: dispersion-correction

librsb

license

A shared memory parallel sparse matrix computations library for the Recursive Sparse Blocks format implementing the Sparse BLAS standard

Tags: linear-algebra openmp

LSDalton

Release license forks issues issues

Linear scaling molecular electronic structure program

Tags: electronic-structure relativistic

MESA

Release license stars forks last-commit issues pulls

Modules for Experiments in Stellar Astrophysics

Tags: stellar astrophysics

MITgcm

Release license stars forks last-commit issues pulls

M.I.T General Circulation Model master code and documentation repository

Tags: ocean-modelling gfd automatic-differentiation data-assimilation exoplanets climate-science

MOKIT

Release license forks issues issues

Molecular orbital transfer utilities and automatic multi-reference calculations

Tags: electronic-structure quantum-chemistry casscf

MOM6

Release license stars forks last-commit issues pulls

Modular Ocean Model

MPAS-Model

Release license stars forks last-commit issues pulls

collaborative project for developing atmosphere, ocean, and other earth-system simulation components for use in climate, regional climate, and weather studies

NASTRAN 93

Release license stars forks last-commit issues pulls

NASTRAN is the NASA Structural Analysis System, a finite element analysis program (FEA)

Tags: finite element structural

NASTRAN 95

Release license stars forks last-commit issues pulls

NASA Structural Analysis System, a finite element analysis program (FEA) completed in the early 1970’s

Tags: finite element structural eigne stability loads

Nek5000

Release license stars forks last-commit issues pulls

MPI parallel higher-order spectral element CFD solver

Tags: cfd computational-fluid-dynamics spectral element higher order mpi parallel les rans

NWChem

Release license stars forks last-commit issues pulls

Open Source High-Performance Computational Chemistry

Tags: computational-chemistry parallel-computing electronic-structure molecular-simulations density-functional-theory hartree-fock quantum-chemistry

Octopus

Release license forks issues issues

Real-space Time-Dependent Density Functional Theory code

Tags: electronic-structure

OFF

Release license stars forks last-commit issues pulls

Finite volume fluid dynamics

Tags: godunov riemann euler runge kutta structured

OpenMolcas

Release license forks issues issues

Quantum chemistry software package for multiconfigurational approaches to the electronic structure

Tags: electronic-structure casscf caspt2

OpenSWPC

Release license stars forks last-commit issues pulls

A Seismic Wave Propagation Code by Parallel Finite Difference Method

pencil-code

Release license stars forks last-commit issues pulls

A high-order finite-difference code for compressible hydrodynamic flows with magnetic fields and particles

Tags: finite-difference hydrodynamics magnetic-field particles

PHANTOM

Release license stars forks last-commit issues pulls

Smoothed particle hydrodynamics and magnetohydrodyanmics for astrophysics simulations

Tags: astrophysics SPH MHD hydrodynamics

preCICE

Release license stars forks last-commit issues pulls

A coupling library for partitioned multi-physics simulations, including, but not restricted to fluid-structure interaction and conjugate heat transfer simulations.

Tags: cpp c python julia matlab rust mpi

PSyclone

Release license stars forks last-commit issues pulls

Domain-specific compiler and code transformation system for Finite Difference/Volume/Element Earth-system models in Fortran

Tags: formatter compiler transformer

qcxms

Release license stars forks last-commit issues pulls

Quantum mechanic mass spectrometry calculation program

Tags: computational-chemistry molecular-dynamics mass-spectrometry

Quantum ESPRESSO

Release license stars forks last-commit issues pulls

Quantum ESPRESSO is an integrated suite of Open-Source computer codes for electronic-structure calculations and materials modeling at the nanoscale

Tags: electronic-structure quantum-chemistry physics molecular-dynamics mpi

QUICK

Release license stars forks last-commit issues pulls

A GPU-enabled ab initio quantum chemistry software package

Tags: computational-chemistry parallel-computing electronic-structure molecular-simulations density-functional-theory hartree-fock quantum-chemistry

QUIP

Release license stars forks last-commit issues pulls

The QUIP package is a collection of software tools to carry out molecular dynamics simulations.

Tags: electronic-structure quantum-chemistry physics molecular-dynamics mpi qm-mm

raffle

Release license stars forks last-commit issues pulls

Package for predicting material interface structures

Tags: material structure phase atomic molecular-modeling

roots-fortran

Release license stars forks last-commit issues pulls

Modern Fortran library for finding the roots of continuous scalar functions of a single real variable

SeisSol

Release license stars forks last-commit issues pulls

A software for the numerical simulation of seismic wave phenomena and earthquake dynamics

Tags: hpc earthquakes dynamic-rupture

siesta

Release license forks issues issues

A first-principles materials simulation code using DFT

Tags: electronic-structure density-functional-theory molecular-dynamics mpi

SLICOT

Release license stars forks last-commit issues pulls

A Fortran subroutines library for systems and control

SNaC

Release license stars forks last-commit issues pulls

A multi-block solver for massively parallel direct numerical simulations (DNS) of fluid flows

Tags: fluid-dynamics fluid-simulation computational-fluid-dynamics turbulence high-performance-computing hpc cfd

SNAP

Release license stars forks last-commit issues pulls

proxy application to model the performance of a modern discrete ordinates neutral particle transport application

Specfem3D

Release license stars forks last-commit issues pulls

Simulates acoustic (fluid), elastic (solid), coupled acoustic/elastic, poroelastic or seismic wave propagation in any type of conforming mesh of hexahedra (structured or not)

tinker

Release license stars forks last-commit issues pulls

Software Tools for Molecular Design

Tags: molecular-modeling

Tracmass

Release license stars forks last-commit issues pulls

Lagrangian particle tracking code

Truchas

Release license forks issues issues

3D Multiphysics Simulation of Metal Casting and Processing

Tags: fluid-dynamics metal-casting multiphysics hpc

Wannier90

Release license stars forks last-commit issues pulls

The Maximally-Localised Generalised Wannier Functions Code

Tags: electronic-structure

WHIZARD

license

Particle Physics Monte Carlo Event Generator

Tags: particle physics parallel mpi monte carlo optimization sampling integration

WRF

Release license stars forks last-commit issues pulls

Weather Research and Forecasting model

xtb

Release license stars forks last-commit issues pulls

Semiempirical Extended Tight-Binding Program Package

Tags: quantum-chemistry computational-chemistry atomistic-simulations

See package index guidelines for how to get your project listed.